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Sharing our progress toward recovery

Research Summaries

Discover what the latest science from the RECOVER Initiative means for our ability to understand, diagnose, prevent, and treat Long COVID.

This page contains descriptions of findings from RECOVER research studies. These descriptions use plain language and a format that is easy to understand.

If you want to learn more about the scientific discoveries described here, you can also browse and search the complete list of RECOVER Publications.

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Long COVID patients, caregivers, and community members contribute to all parts of RECOVER, including scientific research. These chosen members of the community are known as RECOVER Representatives. This paper, written by a team of RECOVER Representatives and researchers, talks about why they chose to work together and how their partnership has improved the study. They summarize some of the impacts of Long COVID and highlight the roles that patient advocacy can play in research. They also discuss what progress has been made so far in studying Long COVID and what challenges lie ahead. The authors state that the result of Representatives working together with researchers on study design, ways to include patients, and sharing community concerns has set a new example for the design of future biomedical research studies.

Short Summary
EHR Adult Health Disparities New-onset and Pre-existing Conditions

Yoo, YJ; Wilkins, KJ; Alakwaa, F; et. al.; N3C and RECOVER Consortia, Clinical Journal of the American Society of Nephrology

Acute Kidney Injury (AKI) can happen when people get very sick with COVID-19. People in the hospital with COVID-19 are more likely to die if they also get AKI. However, there is not enough research to understand how many people have had AKI since the start of the COVID-19 pandemic or what increases the chances of getting AKI. In this RECOVER study, researchers looked at the electronic health records (EHRs) from 53 hospitals across the United States. They studied adults who were in the hospital with COVID-19 between March 2020 and January 2022. To find out who had AKI, the researchers looked at blood tests that show how well the kidneys are working and diagnosis codes (what doctors use to say what’s wrong with the patient). To understand where people were getting sick, researchers split the country into 4 parts: Northeast, Midwest, South, and West. They also looked at different time periods during the pandemic. Out of 336,473 people in the study, 129,176 (38%) had AKI. People with AKI were also more likely to die than those without AKI. The South and the West had the most cases of AKI. Researchers found that AKI cases went down after the first big wave of COVID-19, but then went back up during the Delta and Omicron waves. This shows that different types of COVID-19 might affect the kidneys differently. This study is important because it helps us understand how COVID-19 can hurt people’s kidneys, and how it can change over time. It also helps us learn how COVID-19 is linked to things like age, sex, race, and other health problems in different areas of the country.

Cognitive issues, such as memory problems and difficulty thinking clearly, may increase the risk of death from COVID-19, especially for people with HIV. Many people with cognitive issues never receive a formal diagnosis. This is particularly true for people with HIV, who face higher rates of HIV-related cognitive issues and age-related thinking problems. Researchers wanted to understand how pre-existing cognitive problems in people with and without HIV affect their risk of death from COVID-19.  

The research team studied 64 people with HIV who tested positive for COVID-19 between March 2020 and March 2021. They compared them to 463 people without HIV, matched by age, sex, race, and zip code. First, they checked electronic medical records for dementia diagnoses. Then, they reviewed additional information including HIV characteristics from medical providers and reviewed clinical notes from the year before COVID-19 to identify “cognitive concerns.” These included any documented worries about memory loss, thinking problems, or prescriptions for medications used to treat cognitive symptoms. These data were analyzed to determine the relationship between pre-existing cognitive issues and death after COVID in people with HIV and people without HIV.  

In the group of people without cognitive issues, 3.9% of people without HIV and 10% of people with HIV died following COVID infection. However, in the group with cognitive issues, 18% of people without HIV and 40% of people with HIV died after COVID infection. People with HIV who had documented preexisting cognitive issues before infection had roughly a threefold-increased odds of death after COVID infection.   

These findings suggest that assessing thinking and memory problems is crucial for COVID-19 care, particularly for people with HIV. Many cognitive issues go undiagnosed, especially in vulnerable populations. Healthcare providers should carefully evaluate cognitive function when determining COVID-19 risk. Better cognitive screening could help identify those at highest risk for severe COVID-19 outcomes. 

To understand Long COVID, researchers must be able to figure out which patients have it. Our understanding of Long COVID is evolving and it has been difficult to know who had Long COVID, especially in children. We need a reliable method to identify who might have Long COVID using existing health data.  

The purpose of this study was to create and test a computer program, called an algorithm, to find out which children have Long COVID based on their electronic health records (EHRs). EHRs (digital medical charts that have health data like doctor visits, lab results, and other health history) are an important source of data for research studies on Long COVID. The algorithm looks at EHRs to find patterns in the diagnoses, prescribed medications, procedures, and lab tests children received after having COVID-19. These patterns can be described as a phenotype, or a set of measured or visible traits, that can tell us who had Long COVID.    

The algorithm correctly identified 67% of the patients who had a Long COVID diagnosis from the EHRs. Among the patients who the algorithm said had Long COVID, 91% had a Long COVID diagnosis. Overall, the algorithm was correct in identifying whether a patient had a Long COVID diagnosis 99% of the time. This means the phenotype can be used to recognize which children have Long COVID in EHR data for future studies, or to screen patients to participate in clinical trials. 

Short Summary
EHR Adult New-onset and Pre-existing Conditions Risk Factors

Pfaff, ER; Girvin, AT; Crosskey, M; et al., Journal of American Medical Informatics Association

A quick way for scientists to identify patterns in a large set of data is by teaching computers to find those patterns for them. To do this, the scientist creates a set of instructions for a computer to follow, called an algorithm, to locate exactly what the scientist is looking for. When that algorithm is plugged into a software program, a computer can run the algorithm many times and learn from it. This process improves the algorithm and it becomes more accurate over time. This is called machine learning. Machine learning can be very helpful and accurate, but it is also challenging to share between researchers because each computer can learn things on its own that can be difficult to recreate. When a computer arrives at an answer that a scientist cannot recreate, it is known as a black-box algorithm.

In order for one research team to share their findings with another research team, they must be able to recreate the steps of the algorithm to “de-black-box" it. This was done by researchers from the National COVID Cohort Collaborative (N3C) as part of the National Institutes of Health (NIH) RECOVER Initiative. The N3C team first identified a phenotype (measured or visible traits) for patients who were at a higher risk of developing Long COVID by creating and training a machine learning-based algorithm. Then, with RECOVER’s support, the N3C researchers worked with researchers from another NIH study called All of Us. They were able to re-create the machine learning-based algorithm, leading to the same phenotype. This means that they were able to “de-black-box" their algorithm. This case can be used as a guide of best practices when sharing algorithm data between research teams. This way, algorithms can be used by many research teams to better understand Long COVID.

To find another way to know if children had COVID-19, researchers compared health records of 2 groups of children: children who only had a positive antibody test and children who had a positive PCR test. A positive antibody test means a child had COVID-19 in the past, had the COVID-19 vaccine, or both. A positive PCR test means a child currently has COVID-19. Researchers used data from children’s hospitals in the National Pediatric Learning Health System (PEDSnet) network.

Antibody tests found 2,714 children who had COVID-19 and didn’t have a positive PCR test or COVID-19 vaccine. If researchers used only PCR tests, they wouldn’t have known these children had COVID-19. Knowing if children had COVID-19 is the first step to know their risk of Long COVID and if symptoms could be related to Long COVID.

Short Summary
Observational Adult

Horwitz, LI; Thaweethai, T; Brosnahan, SB; et al., PLOS One

Having COVID-19 can lead to new symptoms or symptoms that do not go away. This condition is called Long COVID. RECOVER researchers are working to answer questions about Long COVID in adults. To do this, they are studying more than 14,700 adults in the US to understand how common Long COVID is in adults; how the body changes when someone has Long COVID; what makes some people more likely to develop Long COVID, such as where a person lives and their age, race, and sex; and what happens in the body that might cause Long COVID. This paper is important because it can show other scientists how to do their own research on Long COVID in adults.

Research Summary
Observational Adult Broad Symptoms Health Disparities New-onset and Pre-existing Conditions

Thaweethai, T; Jolley, SE; Karlson, EW; et al., JAMA

RECOVER researchers used data from the RECOVER observational cohort study in adults ages 18 and over. They compared symptoms reported in surveys by participants who did and did not have COVID-19. Researchers found 37 symptoms that participants who had COVID-19 reported more often after having COVID-19 compared to participants who never had COVID-19. A combination of 12 of these symptoms helped identify participants with Long COVID, including feeling tired and unwell after activity, feeling weak and tired (fatigue), and brain fog. A definition of Long COVID based on symptoms is important for future research and finding treatments. Read the Research Q&A

Short Summary
EHR Adult Vaccination

Brannock, MD; Chew, RF; Preiss, AJ; et al., Nature Communications

RECOVER researchers wanted to understand whether being vaccinated before having COVID-19 lowered the chance of developing Long COVID. They used electronic health records (EHR) to study the effect of vaccination using EHR for two groups of people who had COVID-19. One group was based on clinic data and represented more than 47,000 people. In this group, 695 were diagnosed with Long COVID in clinics and more than 26,000 were fully vaccinated. The other group represented almost 200,000 individuals who had COVID-19. The researchers used a computer program to estimate who might have Long COVID in this group based on their medical and symptom information. In this group, more than 86,000 people represented were fully vaccinated. The researchers made sure that the people in the vaccinated and unvaccinated groups were as similar to each other as possible in terms of the same sex, age, race, and medical history. 

To test whether vaccination lowered the chance of developing Long COVID, they made comparisons within each group. They used several different definitions of Long COVID and several different statistical tests to figure out whether vaccination status affected Long COVID. For both of the study groups and for all definitions of Long COVID and each statistical test in the analysis, the researchers got the same answer: people who were vaccinated before having COVID-19 were less likely to develop Long COVID.

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